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CHM13v2.0 Segmental Duplications
Raw
README.md

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node_metadata.tsv

A table with one row per unique genomic region (node) involved in a structural duplication.

Column Description
id Unique ID for the genomic region (chr:start-end)
gene_name Ensembl or Liftoff-assigned gene name overlapping this region (if any)
gene_biotype Gene biotype (e.g., lncRNA, protein_coding)
Name Short name from Liftoff GFF3 Name attribute
source_gene_common_name Common name for the gene
source_length Length of the region in bp
telomeric Boolean: Is this region telomeric?
pericentromeric Boolean: Is this region pericentromeric?
acrocentric Boolean: Is this region acrocentric?
feature_start Start of overlapping gene/transcript feature
feature_end End of overlapping gene/transcript feature
num_edges Number of duplications (edges) this region is involved in
cc_size Number of nodes in the connected component
component_id Unique identifier for the connected component
genes_in_cc Semicolon-separated list of all gene names in the component
num_genes Count of unique genes in the component
telomeric_frac_in_cc % of nodes in the component that are telomeric
pericentromeric_frac_in_cc % pericentromeric
acrocentric_frac_in_cc % acrocentric
overlap_frac Fraction of the region that overlaps the feature from annotation (e.g. gene body)

edges.tsv

Column Description
source ID of the first region in the duplication pair
target ID of the second region
abs_length_diff Absolute difference in length between the two regions
src_component_id Component ID assigned based on the source node
Raw
edges.tsv
We can't make this file beautiful and searchable because it's too large.
source target abs_length_diff src_component_id
chr1:1-13731 chr9:150595369-150617116 8017 0
chr9:150595369-150617116 chr1:1-13731 8017 0
chr1:3-140066 chr6:171986258-172126591 270 1
chr6:171986258-172126591 chr1:3-140066 270 1
chr1:16-13731 chr20:599-21749 7435 2
chr1:16-13731 chr7:156-22557 8686 2
chr20:599-21749 chr1:16-13731 7435 2
chr7:156-22557 chr1:16-13731 8686 2
chr1:16-198196 chr5:181848663-182045430 1413 3
chr5:181848663-182045430 chr1:16-198196 1413 3
chr19:197767-210319 chr1:3094-10547 5099 4
chr19:197767-210319 chr6:172114937-172122390 5099 4
chr1:3094-10547 chr19:197767-210319 5099 4
chr6:172114937-172122390 chr19:197767-210319 5099 4
chr17:84228420-84260309 chr1:5519-38160 752 5
chr1:5519-38160 chr17:84228420-84260309 752 5
chr18:252586-254906 chr1:8267-10546 41 6
chr18:252586-254906 chr20:16271-18552 39 6
chr18:252586-254906 chr5:182027965-182030236 49 6
chr18:252586-254906 chr6:172114938-172117209 49 6
chr18:252586-254906 chr7:17072-19356 36 6
chr18:252586-254906 chr9:150598566-150600849 37 6
chr1:8267-10546 chr18:252586-254906 41 6
chr20:16271-18552 chr18:252586-254906 39 6
chr5:182027965-182030236 chr18:252586-254906 49 6
chr6:172114938-172117209 chr18:252586-254906 49 6
chr7:17072-19356 chr18:252586-254906 36 6
chr9:150598566-150600849 chr18:252586-254906 37 6
chr1:24123-25439 chr1:24875-26285 94 7
chr1:24875-26285 chr1:24123-25439 94 7
chr1:24123-25486 chr1:24734-26285 188 8
chr1:24734-26285 chr1:24123-25486 188 8
chr1:38155-64366 chr4:121723048-121750652 1393 9
chr4:121723048-121750652 chr1:38155-64366 1393 9
chr4:121723048-121750652 chr5:181973195-181999425 1374 9
chr4:121723048-121750652 chr6:172056130-172082367 1367 9
chr5:181973195-181999425 chr4:121723048-121750652 1374 9
chr6:172056130-172082367 chr4:121723048-121750652 1367 9
chr1:242400705-242434576 chr1:38155-70752 1274 10
chr1:242400705-242434576 chr5:181966790-181999425 1236 10
chr1:242400705-242434576 chr6:172049728-172082367 1232 10
chr1:38155-70752 chr1:242400705-242434576 1274 10
chr1:38155-70752 chrY:24515111-24549088 1380 10
chr1:38155-70752 chrY:26135092-26169041 1352 10
chr5:181966790-181999425 chr1:242400705-242434576 1236 10
chr5:181966790-181999425 chrY:24515111-24549088 1342 10
chr5:181966790-181999425 chrY:26135092-26169041 1314 10
chr6:172049728-172082367 chr1:242400705-242434576 1232 10
chr6:172049728-172082367 chrY:24515111-24549088 1338 10
chr6:172049728-172082367 chrY:26135092-26169041 1310 10
chrY:24515111-24549088 chr1:38155-70752 1380 10
chrY:24515111-24549088 chr5:181966790-181999425 1342 10
chrY:24515111-24549088 chr6:172049728-172082367 1338 10
chrY:26135092-26169041 chr1:38155-70752 1352 10
chrY:26135092-26169041 chr5:181966790-181999425 1314 10
chrY:26135092-26169041 chr6:172049728-172082367 1310 10
chr1:223078514-223110542 chr1:40138-70752 1414 11
chr1:223078514-223110542 chr5:181966790-181997442 1376 11
chr1:223078514-223110542 chr6:172049728-172080384 1372 11
chr1:40138-70752 chr1:223078514-223110542 1414 11
chr5:181966790-181997442 chr1:223078514-223110542 1376 11
chr6:172049728-172080384 chr1:223078514-223110542 1372 11
chr16:96290243-96302674 chr1:58194-70752 127 12
chr16:96290243-96302674 chr5:181966790-181979375 154 12
chr16:96290243-96302674 chr6:172049728-172062304 145 12
chr1:58194-70752 chr16:96290243-96302674 127 12
chr1:58194-70752 chr20:21720-34154 124 12
chr1:58194-70752 chr2:242656656-242669206 8 12
chr1:58194-70752 chr7:22528-34974 112 12
chr1:58194-70752 chr9:150582957-150595398 117 12
chr20:21720-34154 chr1:58194-70752 124 12
chr20:21720-34154 chr5:181966790-181979375 151 12
chr20:21720-34154 chr6:172049728-172062304 142 12
chr2:242656656-242669206 chr1:58194-70752 8 12
chr2:242656656-242669206 chr5:181966790-181979375 35 12
chr2:242656656-242669206 chr6:172049728-172062304 26 12
chr5:181966790-181979375 chr16:96290243-96302674 154 12
chr5:181966790-181979375 chr20:21720-34154 151 12
chr5:181966790-181979375 chr2:242656656-242669206 35 12
chr5:181966790-181979375 chr7:22528-34974 139 12
chr5:181966790-181979375 chr9:150582957-150595398 144 12
chr6:172049728-172062304 chr16:96290243-96302674 145 12
chr6:172049728-172062304 chr20:21720-34154 142 12
chr6:172049728-172062304 chr2:242656656-242669206 26 12
chr6:172049728-172062304 chr7:22528-34974 130 12
chr6:172049728-172062304 chr9:150582957-150595398 135 12
chr7:22528-34974 chr1:58194-70752 112 12
chr7:22528-34974 chr5:181966790-181979375 139 12
chr7:22528-34974 chr6:172049728-172062304 130 12
chr9:150582957-150595398 chr1:58194-70752 117 12
chr9:150582957-150595398 chr5:181966790-181979375 144 12
chr9:150582957-150595398 chr6:172049728-172062304 135 12
chr1:64365-70752 chr4:121970329-121976721 5 13
chr4:121970329-121976721 chr1:64365-70752 5 13
chr4:121970329-121976721 chr5:181966790-181973196 14 13
chr4:121970329-121976721 chr6:172049728-172056131 11 13
chr5:181966790-181973196 chr4:121970329-121976721 14 13
chr6:172049728-172056131 chr4:121970329-121976721 11 13
chr10:38526078-38527423 chr1:69404-70752 3 14
chr10:38526078-38527423 chr5:181966790-181968154 19 14
chr10:38526078-38527423 chr6:172049728-172051086 13 14
chr1:69404-70752 chr10:38526078-38527423 3 14
chr5:181966790-181968154 chr10:38526078-38527423 19 14
chr6:172049728-172051086 chr10:38526078-38527423 13 14
chr15:99627522-99680204 chr1:70777-127798 4339 15
chr15:99627522-99680204 chr5:181915696-181966765 1613 15
chr15:99627522-99680204 chr6:171998224-172049703 1203 15
chr1:70777-127798 chr15:99627522-99680204 4339 15
chr5:181915696-181966765 chr15:99627522-99680204 1613 15
chr6:171998224-172049703 chr15:99627522-99680204 1203 15
chr11:71693-198119 chr1:70777-203711 6508 16
chr19:74138-193471 chr1:70777-203711 13601 16
chr1:70777-203711 chr11:71693-198119 6508 16
chr1:70777-203711 chr19:74138-193471 13601 16
chr1:70777-203711 chr3:200909070-201028229 13775 16
chr3:200909070-201028229 chr1:70777-203711 13775 16
chr11:128969-144600 chr4:167611803-167627338 96 17
chr19:123609-139607 chr4:167611803-167627338 463 17
chr1:127787-143710 chr4:167611803-167627338 388 17
chr3:200962899-200978764 chr4:167611803-167627338 330 17
chr4:167611803-167627338 chr11:128969-144600 96 17
chr4:167611803-167627338 chr19:123609-139607 463 17
chr4:167611803-167627338 chr1:127787-143710 388 17
chr4:167611803-167627338 chr3:200962899-200978764 330 17
chr4:167611803-167627338 chr5:181900116-181915707 56 17
chr5:181900116-181915707 chr4:167611803-167627338 56 17
chr1:127787-143730 chr20:39929-55549 323 18
chr20:39929-55549 chr1:127787-143730 323 18
chr11:128969-149740 chr2:242629551-242650885 563 19
chr19:123609-144748 chr2:242629551-242650885 195 19
chr1:127787-148854 chr2:242629551-242650885 267 19
chr2:242629551-242650885 chr11:128969-149740 563 19
chr2:242629551-242650885 chr19:123609-144748 195 19
chr2:242629551-242650885 chr1:127787-148854 267 19
chr2:242629551-242650885 chr3:200957758-200978764 328 19
chr2:242629551-242650885 chr5:181894973-181915707 600 19
chr3:200957758-200978764 chr2:242629551-242650885 328 19
chr5:181894973-181915707 chr2:242629551-242650885 600 19
chr19:123609-149861 chrY:24554859-24586750 5639 20
chr19:123609-149861 chrY:26174809-26206700 5639 20
chr1:127787-153870 chrY:24554859-24586750 5808 20
chr1:127787-153870 chrY:26174809-26206700 5808 20
chr5:181889962-181915707 chrY:24554859-24586750 6146 20
chr5:181889962-181915707 chrY:26174809-26206700 6146 20
chrY:24554859-24586750 chr19:123609-149861 5639 20
chrY:24554859-24586750 chr1:127787-153870 5808 20
chrY:24554859-24586750 chr5:181889962-181915707 6146 20
chrY:26174809-26206700 chr19:123609-149861 5639 20
chrY:26174809-26206700 chr1:127787-153870 5808 20
chrY:26174809-26206700 chr5:181889962-181915707 6146 20
chr11:128969-159995 chr20:66108099-66133963 5162 21
chr19:123609-155374 chr20:66108099-66133963 5901 21
chr1:127787-158763 chr20:66108099-66133963 5112 21
chr20:66108099-66133963 chr11:128969-159995 5162 21
chr20:66108099-66133963 chr19:123609-155374 5901 21
chr20:66108099-66133963 chr1:127787-158763 5112 21
chr20:66108099-66133963 chr3:200947273-200978764 5627 21
chr20:66108099-66133963 chr5:181885062-181915707 4781 21
chr3:200947273-200978764 chr20:66108099-66133963 5627 21
chr5:181885062-181915707 chr20:66108099-66133963 4781 21
chr16:96213825-96284456 chr1:127787-203711 5293 22
chr1:127787-203711 chr16:96213825-96284456 5293 22
chr1:127787-203711 chr7:40749-110577 6096 22
chr1:127787-203711 chr9:150503618-150577184 2358 22
chr7:40749-110577 chr1:127787-203711 6096 22
chr9:150503618-150577184 chr1:127787-203711 2358 22
chr1:127787-205260 chr1:242440153-242512838 4788 23
chr1:242440153-242512838 chr1:127787-205260 4788 23
chr1:127787-205266 chr4:121896675-121964543 9611 24
chr4:121896675-121964543 chr1:127787-205266 9611 24
chr10:38441753-38520298 chr1:127787-210442 4110 25
chr1:127787-210442 chr10:38441753-38520298 4110 25
chr1:127787-245234 chr1:223116306-223230821 2932 26
chr1:223116306-223230821 chr1:127787-245234 2932 26
chr1:138513-140841 chr1:227152195-227154656 133 27
chr1:227152195-227154656 chr1:138513-140841 133 27
chr11:141725-159461 chr1:227154664-227175007 2607 28
chr16:96252346-96271708 chr1:227154664-227175007 981 28
chr1:140859-158241 chr1:227154664-227175007 2961 28
chr1:227154664-227175007 chr11:141725-159461 2607 28
chr1:227154664-227175007 chr16:96252346-96271708 981 28
chr1:227154664-227175007 chr1:140859-158241 2961 28
chr1:227154664-227175007 chr3:200947800-200965758 2385 28
chr1:227154664-227175007 chr5:181882174-181902975 458 28
chr1:227154664-227175007 chr7:53510-72041 1812 28
chr1:227154664-227175007 chr9:150542134-150564427 1950 28
chr3:200947800-200965758 chr1:227154664-227175007 2385 28
chr5:181882174-181902975 chr1:227154664-227175007 458 28
chr7:53510-72041 chr1:227154664-227175007 1812 28
chr9:150542134-150564427 chr1:227154664-227175007 1950 28
chr10:38505680-38507016 chr9:42771-44104 3 29
chr11:142257-143611 chr9:42771-44104 21 29
chr16:96269822-96271176 chr9:42771-44104 21 29
chr19:137281-138615 chr9:42771-44104 1 29
chr1:141391-142718 chr9:42771-44104 6 29
chr1:223130158-223131490 chr9:42771-44104 1 29
chr1:227173120-227174448 chr9:42771-44104 5 29
chr1:242453575-242454902 chr9:42771-44104 6 29
chr20:53189-54537 chr9:42771-44104 15 29
chr20:66119354-66120686 chr9:42771-44104 1 29
chr2:242636011-242637350 chr9:42771-44104 6 29
chr3:200963891-200965226 chr9:42771-44104 2 29
chr4:121949953-121951285 chr9:42771-44104 1 29
chr5:181901108-181902443 chr9:42771-44104 2 29
chr7:54042-55396 chr9:42771-44104 21 29
chr9:150562541-150563895 chr9:42771-44104 21 29
chr9:42771-44104 chr10:38505680-38507016 3 29
chr9:42771-44104 chr11:142257-143611 21 29
chr9:42771-44104 chr16:96269822-96271176 21 29
chr9:42771-44104 chr19:137281-138615 1 29
chr9:42771-44104 chr1:141391-142718 6 29
chr9:42771-44104 chr1:223130158-223131490 1 29
chr9:42771-44104 chr1:227173120-227174448 5 29
chr9:42771-44104 chr1:242453575-242454902 6 29
chr9:42771-44104 chr20:53189-54537 15 29
chr9:42771-44104 chr20:66119354-66120686 1 29
chr9:42771-44104 chr2:242636011-242637350 6 29
chr9:42771-44104 chr3:200963891-200965226 2 29
chr9:42771-44104 chr4:121949953-121951285 1 29
chr9:42771-44104 chr5:181901108-181902443 2 29
chr9:42771-44104 chr7:54042-55396 21 29
chr9:42771-44104 chr9:150562541-150563895 21 29
chr9:42771-44104 chrY:24574181-24575514 0 29
chr9:42771-44104 chrY:26194132-26195465 0 29
chrY:24574181-24575514 chr9:42771-44104 0 29
chrY:26194132-26195465 chr9:42771-44104 0 29
chr11:142528-143611 chr2:113990467-113991550 0 30
chr19:137531-138615 chr2:113990467-113991550 1 30
chr1:141641-142718 chr2:113990467-113991550 6 30
chr1:223130408-223131490 chr2:113990467-113991550 1 30
chr2:113990467-113991550 chr11:142528-143611 0 30
chr2:113990467-113991550 chr19:137531-138615 1 30
chr2:113990467-113991550 chr1:141641-142718 6 30
chr2:113990467-113991550 chr1:223130408-223131490 1 30
chr11:144594-150267 chr7:55953334-55959047 40 31
chr16:96263159-96268836 chr7:55953334-55959047 36 31
chr19:139601-145275 chr7:55953334-55959047 39 31
chr1:143704-149381 chr7:55953334-55959047 36 31
chr1:223132474-223138170 chr7:55953334-55959047 17 31
chr1:227166450-227172131 chr7:55953334-55959047 32 31
chr1:242455885-242461570 chr7:55953334-55959047 28 31
chr20:66112686-66118371 chr7:55953334-55959047 28 31
chr3:200957231-200962905 chr7:55953334-55959047 39 31
chr4:121943307-121948980 chr7:55953334-55959047 40 31
chr5:181894446-181900122 chr7:55953334-55959047 37 31
chr7:55953334-55959047 chr11:144594-150267 40 31
chr7:55953334-55959047 chr16:96263159-96268836 36 31
chr7:55953334-55959047 chr19:139601-145275 39 31
chr7:55953334-55959047 chr1:143704-149381 36 31
chr7:55953334-55959047 chr1:223132474-223138170 17 31
chr7:55953334-55959047 chr1:227166450-227172131 32 31
chr7:55953334-55959047 chr1:242455885-242461570 28 31
chr7:55953334-55959047 chr20:66112686-66118371 28 31
chr7:55953334-55959047 chr3:200957231-200962905 39 31
chr7:55953334-55959047 chr4:121943307-121948980 40 31
chr7:55953334-55959047 chr5:181894446-181900122 37 31
chr7:55953334-55959047 chr7:56382-62052 43 31
chr7:55953334-55959047 chr9:150555884-150561560 37 31
chr7:55953334-55959047 chrY:24576498-24582202 9 31
chr7:55953334-55959047 chrY:26196448-26202151 10 31
chr7:56382-62052 chr7:55953334-55959047 43 31
chr9:150555884-150561560 chr7:55953334-55959047 37 31
chrY:24576498-24582202 chr7:55953334-55959047 9 31
chrY:26196448-26202151 chr7:55953334-55959047 10 31
chr19:139601-152371 chr7:56516005-56529837 1062 32
chr1:143704-154585 chr7:56516005-56529837 2951 32
chr7:56382-68382 chr7:56516005-56529837 1832 32
chr7:56516005-56529837 chr19:139601-152371 1062 32
chr7:56516005-56529837 chr1:143704-154585 2951 32
chr7:56516005-56529837 chr7:56382-68382 1832 32
chr1:143704-210442 chr7:45925574-45985683 6629 33
chr7:45925574-45985683 chr1:143704-210442 6629 33
chr16:96264940-96268593 chr7:64313725-64317582 204 34
chr1:143947-147600 chr7:64313725-64317582 204 34
chr2:242631066-242634702 chr7:64313725-64317582 221 34
chr5:181896227-181899880 chr7:64313725-64317582 204 34
chr7:64313725-64317582 chr16:96264940-96268593 204 34
chr7:64313725-64317582 chr1:143947-147600 204 34
chr7:64313725-64317582 chr2:242631066-242634702 221 34
chr7:64313725-64317582 chr5:181896227-181899880 204 34
chr7:64313725-64317582 chr9:150557665-150561317 205 34
chr9:150557665-150561317 chr7:64313725-64317582 205 34
chr11:148588-185123 chr7:39919853-39957186 798 35
chr1:147702-190755 chr7:39919853-39957186 5720 35
chr1:223136478-223172008 chr7:39919853-39957186 1803 35
chr1:242459874-242498221 chr7:39919853-39957186 1014 35
chr7:39919853-39957186 chr11:148588-185123 798 35
chr7:39919853-39957186 chr1:147702-190755 5720 35
chr7:39919853-39957186 chr1:223136478-223172008 1803 35
chr7:39919853-39957186 chr1:242459874-242498221 1014 35
chr7:39919853-39957186 chr7:60373-97571 135 35
chr7:60373-97571 chr7:39919853-39957186 135 35
chr1:147721-178735 chr7:51542320-51572116 1218 36
chr7:51542320-51572116 chr1:147721-178735 1218 36
chr11:149177-195840 chr7:129929758-129971890 4531 37
chr16:96216095-96264249 chr7:129929758-129971890 6022 37
chr19:144185-191123 chr7:129929758-129971890 4806 37
chr1:148291-201438 chr7:129929758-129971890 11015 37
chr3:200911352-200958321 chr7:129929758-129971890 4837 37
chr7:129929758-129971890 chr11:149177-195840 4531 37
chr7:129929758-129971890 chr16:96216095-96264249 6022 37
chr7:129929758-129971890 chr19:144185-191123 4806 37
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chr1:113461364-113462832 chr15:55049832-55051350 50 894
chr1:113461364-113462833 chr6:47990262-47991817 86 895
chr6:47990262-47991817 chr1:113461364-113462833 86 895
chr1:113461407-113462847 chr4:85458154-85459611 17 896
chr4:85458154-85459611 chr1:113461407-113462847 17 896
chr12:51675582-51677071 chr1:113461408-113462852 45 897
chr1:113461408-113462852 chr12:51675582-51677071 45 897
chr13:65006278-65007506 chr1:113461645-113462833 40 898
chr1:113461645-113462833 chr13:65006278-65007506 40 898
chr1:114548680-114549918 chr8:75806194-75807114 318 899
chr8:75806194-75807114 chr1:114548680-114549918 318 899
chr1:114715896-114717299 chr6:4910173-4911585 9 900
chr6:4910173-4911585 chr1:114715896-114717299 9 900
chr1:114715943-114716979 chr4:20870356-20871381 11 901
chr4:20870356-20871381 chr1:114715943-114716979 11 901
chr10:60642492-60644161 chr1:114925849-114927505 13 902
chr1:114925849-114927505 chr10:60642492-60644161 13 902
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chr1:115575455-115578087 chrX:68368816-68371618 170 904
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chr1:115576447-115578082 chr8:17496824-17498446 13 905
chr8:17496824-17498446 chr1:115576447-115578082 13 905
chr13:27049983-27050929 chr1:115863541-115865117 630 906
chr1:115863541-115865117 chr13:27049983-27050929 630 906
chr1:115863541-115865873 chr8:142586374-142588140 566 907
chr8:142586374-142588140 chr1:115863541-115865873 566 907
chr8:142586374-142588140 chr8:82239394-82241153 7 907
chr8:82239394-82241153 chr8:142586374-142588140 7 907
chr18:32601795-32603546 chr1:115863557-115865879 571 908
chr1:115863557-115865879 chr18:32601795-32603546 571 908
chr1:115863558-115865886 chrX:99297224-99299110 442 909
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chr8:82239390-82241133 chr1:115863559-115865877 575 910
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chr1:115863561-115865623 chr8:82722599-82724085 576 911
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chr8:82722599-82724085 chr15:63624150-63626748 1112 911
chr8:82722599-82724085 chr1:115863561-115865623 576 911
chr8:82722599-82724085 chr3:39348068-39349559 5 911
chr8:82722599-82724085 chr8:142586630-142588120 4 911
chr1:115863561-115865875 chr9:4949072-4951087 299 912
chr9:4949072-4951087 chr1:115863561-115865875 299 912
chr1:115863562-115865845 chr1:240331123-240332841 565 913
chr1:240331123-240332841 chr1:115863562-115865845 565 913
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chr1:115863566-115865866 chr2:174797980-174799709 571 915
chr2:174797980-174799709 chr18:32601805-32603533 1 915
chr2:174797980-174799709 chr1:115863566-115865866 571 915
chr1:115863567-115865884 chr2:201546469-201548215 571 916
chr2:201546469-201548215 chr1:115863567-115865884 571 916
chr1:115863574-115865877 chrX:99329582-99331310 575 917
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chr18:32601816-32603542 chr6:5477811-5479548 11 918
chr1:115863577-115865875 chr6:5477811-5479548 561 918
chr6:5477811-5479548 chr18:32601816-32603542 11 918
chr6:5477811-5479548 chr1:115863577-115865875 561 918
chr10:47301893-47302986 chr1:115864065-115865421 263 919
chr10:48816605-48817695 chr1:115864065-115865421 266 919
chr10:48816605-48817695 chr9:4949266-4950319 37 919
chr1:115864065-115865421 chr10:47301893-47302986 263 919
chr1:115864065-115865421 chr10:48816605-48817695 266 919
chr9:4949266-4950319 chr10:48816605-48817695 37 919
chr1:115864248-115865875 chr7:86233326-86234677 276 920
chr7:86233326-86234677 chr1:115864248-115865875 276 920
chr1:115864339-115865891 chrX:117598458-117600194 184 921
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chr11:5630394-5631672 chr1:115864622-115865875 25 922
chr1:115864622-115865875 chr11:5630394-5631672 25 922
chr12:92861303-92862573 chr1:115864622-115865881 11 923
chr1:115864622-115865881 chr12:92861303-92862573 11 923
chr13:20141143-20142789 chr1:115864623-115865876 393 924
chr1:115864623-115865876 chr13:20141143-20142789 393 924
chr12:9009450-9011343 chr1:115864625-115865875 643 925
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chr1:115864625-115865875 chr9:137795514-137796806 42 925
chr9:137795514-137796806 chr1:115864625-115865875 42 925
chr16:57443597-57444897 chr1:115864626-115865883 43 926
chr1:115864626-115865883 chr16:57443597-57444897 43 926
chr17:2194068-2195325 chr1:115864626-115865884 1 927
chr1:115864626-115865884 chr17:2194068-2195325 1 927
chr1:115864627-115865870 chr3:42904876-42906142 23 928
chr3:42904876-42906142 chr1:115864627-115865870 23 928
chr15:97048158-97049438 chr1:115864627-115865871 36 929
chr1:115864627-115865871 chr15:97048158-97049438 36 929
chr13:51857901-51859191 chr1:115864627-115865874 43 930
chr1:115864627-115865874 chr13:51857901-51859191 43 930
chr1:115864628-115865872 chr4:77282004-77283284 36 931
chr4:77282004-77283284 chr1:115864628-115865872 36 931
chr19:11793973-11795260 chr1:115864628-115865874 41 932
chr1:115864628-115865874 chr19:11793973-11795260 41 932
chr1:115864628-115865874 chr2:206901119-206902382 17 932
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chr1:115864628-115865875 chr4:81328436-81329716 33 933
chr1:115864628-115865875 chr6:32178443-32179729 39 933
chr4:81328436-81329716 chr1:115864628-115865875 33 933
chr6:32178443-32179729 chr1:115864628-115865875 39 933
chr1:115864629-115865875 chr9:100564371-100565624 7 934
chr9:100564371-100565624 chr1:115864629-115865875 7 934
chr11:110797790-110799065 chr1:115864630-115865877 28 935
chr1:115864630-115865877 chr11:110797790-110799065 28 935
chr11:3033653-3034864 chr1:116542180-116543399 8 936
chr1:116542180-116543399 chr11:3033653-3034864 8 936
chr13:13593501-13632139 chr1:116598255-116634093 2800 937
chr1:116598255-116634093 chr13:13593501-13632139 2800 937
chr1:116598255-116634093 chr2:91919325-91958067 2904 937
chr2:91919325-91958067 chr1:116598255-116634093 2904 937
chr1:116625440-116671265 chr22:18960124-19007976 2027 938
chr1:116625440-116671265 chr22:19166776-19214640 2039 938
chr1:116625440-116671265 chr22:21637422-21685140 1893 938
chr22:18960124-19007976 chr1:116625440-116671265 2027 938
chr22:19166776-19214640 chr1:116625440-116671265 2039 938
chr22:21637422-21685140 chr1:116625440-116671265 1893 938
chr1:116625556-116634093 chr2:89515246-89523745 38 939
chr1:116625556-116634093 chr2:90217620-90226117 40 939
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chr2:90217620-90226117 chr1:116625556-116634093 40 939
chr1:116657371-116671265 chr22:21544714-21560810 2202 940
chr22:21544714-21560810 chr1:116657371-116671265 2202 940
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chr22:29952194-29954661 chr1:116749849-116751864 452 941
chr1:118627303-118628877 chr3:68681131-68682708 3 942
chr3:68681131-68682708 chr1:118627303-118628877 3 942
chr3:68681131-68682708 chr7:138023038-138024618 3 942
chr7:138023038-138024618 chr3:68681131-68682708 3 942
chr12:18568643-18570227 chr1:118627306-118628869 21 943
chr12:18568643-18570227 chr3:68681139-68682705 18 943
chr12:18568643-18570227 chr5:57102615-57104196 3 943
chr12:18568643-18570227 chr7:138023046-138024621 9 943
chr1:118627306-118628869 chr12:18568643-18570227 21 943
chr3:68681139-68682705 chr12:18568643-18570227 18 943
chr5:57102615-57104196 chr12:18568643-18570227 3 943
chr7:138023046-138024621 chr12:18568643-18570227 9 943
chr1:118788846-118790629 chr4:41354789-41356592 20 944
chr4:41354789-41356592 chr1:118788846-118790629 20 944
chr1:119097724-119099214 chr5:80814745-80816555 320 945
chr5:80814745-80816555 chr1:119097724-119099214 320 945
chr1:119194573-119196498 chr5:75785327-75787317 65 946
chr5:75785327-75787317 chr1:119194573-119196498 65 946
chr1:119562255-119579004 chr1:119595105-119616365 4511 947
chr1:119595105-119616365 chr1:119562255-119579004 4511 947
chr1:119562255-119601440 chr1:119595105-119632436 1854 948
chr1:119595105-119632436 chr1:119562255-119601440 1854 948
chr1:119852100-119862101 chr1:120814463-120824118 346 949
chr1:119852100-119862101 chr1:146188449-146198094 356 949
chr1:120814463-120824118 chr1:119852100-119862101 346 949
chr1:146188449-146198094 chr1:119852100-119862101 356 949
chr1:119852100-119876066 chr1:144515312-144530432 8846 950
chr1:144515312-144530432 chr1:119852100-119876066 8846 950
chr1:119852304-119862101 chr1:148600437-148609874 360 951
chr1:148600437-148609874 chr1:119852304-119862101 360 951
chr1:119852304-119876066 chr1:143617033-143631610 9185 952
chr1:143617033-143631610 chr1:119852304-119876066 9185 952
chr1:119853429-119876066 chr1:142679253-142702137 247 953
chr1:142679253-142702137 chr1:119853429-119876066 247 953
chr1:119853431-119862101 chr1:145257279-145265985 36 954
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chr1:119853431-119863814 chr1:144703501-144714134 250 955
chr1:144703501-144714134 chr1:119853431-119863814 250 955
chr1:119853431-119876066 chr1:145735450-145749209 8876 956
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chr1:120002516-120106995 chr1:148495438-148600443 526 958
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chr1:120002516-120336348 chr1:145265979-145602144 2333 959
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chr1:120002516-120546340 chr1:145654961-146188455 10330 960
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chr1:120588838-120718811 chr1:145852545-145983696 1178 962
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chr1:120337176-120356794 chr5:51484534-51504159 7 967
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chr1:148333950-148406013 chr1:120360728-120431991 800 968
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chr1:143535075-143645656 chr1:145720664-145828135 3110 969
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chr1:146445024-146447373 chr1:120401540-120403801 88 972
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chr9:40628596-40644751 chr1:126846362-126865052 2535 1143
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chr1:126846369-126865052 chr16:39325154-39342172 1665 1145
chr1:126846372-126859872 chr7:66727322-66739198 1624 1146
chr7:66727322-66739198 chr1:126846372-126859872 1624 1146
chr1:126846380-126853536 chr1:143143733-143149953 936 1147
chr1:143143733-143149953 chr1:126846380-126853536 936 1147
chr16:34200368-34217381 chr1:126846426-126865052 1613 1148
chr1:126846426-126865052 chr16:34200368-34217381 1613 1148
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chr1:126846428-126865052 chr17:22540283-22558019 888 1149
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chr1:126846462-126852493 chr1:143742417-143747003 1445 1151
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chr1:126846570-126851807 chr16:32894433-32897696 1974 1156
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chr1:126857040-126865052 chr17:22313283-22320156 1139 1190
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chr22:16970998-16977650 chr16:33233982-33242102 1468 1190
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chr7:58339043-58345892 chr1:126857040-126865052 1163 1190
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chr9:40565614-40588340 chr1:142374135-142399794 2933 1952
chr9:40565614-40588340 chr1:143912817-143936184 641 1952
chr9:40565614-40588340 chr2:87354292-87381017 3999 1952
chr9:40565614-40588340 chr2:89681819-89702228 2317 1952
chr9:40565614-40588340 chr2:90039201-90059563 2364 1952
chr9:40565614-40588340 chr2:90800584-90820995 2315 1952
chr9:40565614-40588340 chr2:91731995-91752759 1962 1952
chr9:42688240-42710838 chr1:143912817-143936184 769 1952
chr9:42688240-42710838 chr2:87354292-87381017 4127 1952
chr9:42688240-42710838 chr2:89681819-89702228 2189 1952
chr9:42688240-42710838 chr2:90039201-90059563 2236 1952
chr9:42688240-42710838 chr2:91731995-91752759 1834 1952
chr1:142374135-142402140 chr9:77553565-77582775 1205 1953
chr1:142374135-142402140 chr9:79963451-79991021 435 1953
chr1:143228359-143256687 chr9:77553565-77582775 882 1953
chr1:143228359-143256687 chr9:79963451-79991021 758 1953
chr1:143910471-143936184 chr9:77553565-77582775 3497 1953
chr1:143910471-143936184 chr9:79963451-79991021 1857 1953
chr2:87351949-87381017 chr9:77553565-77582775 142 1953
chr2:87351949-87381017 chr9:79963451-79991021 1498 1953
chr2:90798240-90820995 chr9:77553565-77582775 6455 1953
chr2:90798240-90820995 chr9:79963451-79991021 4815 1953
chr2:91731995-91755102 chr9:77553565-77582775 6103 1953
chr2:91731995-91755102 chr9:79963451-79991021 4463 1953
chr9:77553565-77582775 chr1:142374135-142402140 1205 1953
chr9:77553565-77582775 chr1:143228359-143256687 882 1953
chr9:77553565-77582775 chr1:143910471-143936184 3497 1953
chr9:77553565-77582775 chr2:87351949-87381017 142 1953
chr9:77553565-77582775 chr2:90798240-90820995 6455 1953
chr9:77553565-77582775 chr2:91731995-91755102 6103 1953
chr9:79963451-79991021 chr1:142374135-142402140 435 1953
chr9:79963451-79991021 chr1:143228359-143256687 758 1953
chr9:79963451-79991021 chr1:143910471-143936184 1857 1953
chr9:79963451-79991021 chr2:87351949-87381017 1498 1953
chr9:79963451-79991021 chr2:90798240-90820995 4815 1953
chr9:79963451-79991021 chr2:91731995-91755102 4463 1953
chr10:43097444-43101827 chr17:21529020-21533672 269 1954
chr14:8528776-8533139 chr17:21529020-21533672 289 1954
chr15:18231906-18236295 chr17:21529020-21533672 263 1954
chr15:19316898-19321283 chr17:21529020-21533672 26
Raw
edges_no_extra.tsv
View raw

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Raw
nodes_metadata.tsv
View raw

(Sorry about that, but we can’t show files that are this big right now.)

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