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September 23, 2019 23:36
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CS112_3.1_gelmanhillsimulation.R
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| library(arm) | |
| library(Matching) | |
| library("ggplot2") | |
| data(lalonde) | |
| ggplot(lalonde, aes(x=age, y=re78)) + | |
| geom_point(color='#2980B9', size = 4) + | |
| geom_smooth(method=lm, color='#2C3E50') | |
| lm1 <- lm(lalonde$re78 ~ lalonde$age) | |
| lm1$coef | |
| # (Intercept) lalonde$age | |
| # 3946.18432 53.39136 | |
| library(arm) | |
| set.seed(123) | |
| sim_results <- sim(lm1, n.sims = 20) | |
| set.seed(232) | |
| # 20 sims is too few to get reliable results | |
| sim_results2 <- sim(lm1, n.sims = 10000) | |
| mean(sim_results2@coef[,1]) | |
| # 3953 -- compare to 3946.18432 (when n.sims is big, e.g., 100K it's a better estimate) | |
| mean(sim_results2@coef[,2]) | |
| #estimate the prediction intervals of y | |
| #for every x in your data set | |
| for(i in 1:10000){ | |
| simulated_ys <- sim_results2@coef[i,1]*rep(1, length(lalonde$age)) + | |
| sim_results2@coef[i,2]*lalonde$age + | |
| rnorm(length(lalonde$age), 0, sim_results2@sigma[i]) | |
| upper.bounds <- simulated_ys + 1.96*(sd(simulated_ys)/sqrt(length(simulated_ys))) | |
| lower.bounds <- simulated_ys - 1.96*(sd(simulated_ys)/sqrt(length(simulated_ys))) | |
| } | |
| prediction_intervals <- do.call(rbind, Map(data.frame, LOWER=lower.bounds, UPPER=upper.bounds)) |
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