Created
September 3, 2015 18:55
-
-
Save ryanlayer/fe5b79c270c3930de51d to your computer and use it in GitHub Desktop.
CNVnator
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| cd ~/src/ | |
| wget http://root.cern.ch/download/root_v6.04.02.source.tar.gz | |
| module load gcc/4.9.2 | |
| module load python/2.7.10 | |
| tar zxvf root_v6.04.02.source.tar.gz | |
| cd root-6.04.02/ | |
| ./configure | |
| make | |
| source bin/thisroot.sh | |
| echo $ROOTSYS | |
| /uufs/chpc.utah.edu/common/home/u6000294/src/root-6.04.02 | |
| cd ../ | |
| git clone https://github.com/abyzovlab/CNVnator.git | |
| cd CNVnator | |
| ln -s ../samtools-1.2/ samtools |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment