Created
April 28, 2014 04:40
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plot sparse matrix pattern
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| import matplotlib.pyplot as plt | |
| from scipy.sparse import coo_matrix | |
| def plot_coo_matrix(m): | |
| if not isinstance(m, coo_matrix): | |
| m = coo_matrix(m) | |
| fig = plt.figure() | |
| ax = fig.add_subplot(111, axisbg='black') | |
| ax.plot(m.col, m.row, 's', color='white', ms=1) | |
| ax.set_xlim(0, m.shape[1]) | |
| ax.set_ylim(0, m.shape[0]) | |
| ax.set_aspect('equal') | |
| for spine in ax.spines.values(): | |
| spine.set_visible(False) | |
| ax.invert_yaxis() | |
| ax.set_aspect('equal') | |
| ax.set_xticks([]) | |
| ax.set_yticks([]) | |
| return ax | |
| shape = (100000, 100000) | |
| rows = np.int_(np.round_(shape[0]*np.random.random(1000))) | |
| cols = np.int_(np.round_(shape[1]*np.random.random(1000))) | |
| vals = np.ones_like(rows) | |
| m = coo_matrix((vals, (rows, cols)), shape=shape) | |
| ax = plot_coo_matrix(m) | |
| ax.figure.show() |
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add "import numpy as np" at the beginning
replace the last with this to plot without error, still a warning for matplotlib 2
#ax.figure.show()
plt.show()