Skip to content

Instantly share code, notes, and snippets.

@djtfmartin
Created July 28, 2025 10:47
Show Gist options
  • Select an option

  • Save djtfmartin/6475b1e887e9381c867432bd1943ce04 to your computer and use it in GitHub Desktop.

Select an option

Save djtfmartin/6475b1e887e9381c867432bd1943ce04 to your computer and use it in GitHub Desktop.
sample-occ.csv
We can make this file beautiful and searchable if this error is corrected: No commas found in this CSV file in line 0.
occurrenceID eventDate decimalLatitude decimalLongitude materialSampleID recordedBy kingdom phylum class order family genus scientificName taxonID sampleSizeValue sampleSizeUnit organismQuantity organismQuantityType basisOfRecord eventID
102.100.100/10601:00d2d306d387c11e63eac2b97f184ac8 2013-04-09 -10.495855 105.566286 102.100.100/10601 Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria ASV:00d2d306d387c11e63eac2b97f184ac8 1957 DNA sequence reads 1 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:02e8e53ad96c9864c41b2cf6fd0aa169 2013-04-09 -10.495855 105.566286 102.100.100/10601 Fungi Ascomycota Dothideomycetes Pleosporales Corynesporascaceae Corynespora Corynespora cassiicola ASV:02e8e53ad96c9864c41b2cf6fd0aa169 1957 DNA sequence reads 2 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:030608bc1fb64907e5e37a7913cd7ec0 2013-04-09 -10.495855 105.566286 102.100.100/10601 Plantae Tracheophyta Magnoliopsida Apiales Araliaceae Panax Panax stipuleanatus ASV:030608bc1fb64907e5e37a7913cd7ec0 1957 DNA sequence reads 3 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:049f8193a1219f6c517b98af44e140e5 2013-04-09 -10.495855 105.566286 102.100.100/10601 ASV:049f8193a1219f6c517b98af44e140e5 1957 DNA sequence reads 2 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:0aa04f03333a2ad38c6ec70c3b8d702c 2013-04-09 -10.495855 105.566286 102.100.100/10601 ASV:0aa04f03333a2ad38c6ec70c3b8d702c 1957 DNA sequence reads 1 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:0c8a7467acc006f1aa59f63106e9bd6e 2013-04-09 -10.495855 105.566286 102.100.100/10601 Chromista Myzozoa Conoidasida Eugregarinorida Monocystidae Monocystis Monocystis ASV:0c8a7467acc006f1aa59f63106e9bd6e 1957 DNA sequence reads 4 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:0eb10867cac23317e32e990c88ee69e2 2013-04-09 -10.495855 105.566286 102.100.100/10601 Fungi Basidiomycota Tremellomycetes Tremellomycetes ASV:0eb10867cac23317e32e990c88ee69e2 1957 DNA sequence reads 1 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:0f67af7ad88a7d4998e8de1b9dc550c9 2013-04-09 -10.495855 105.566286 102.100.100/10601 Animalia Nematoda Nematoda ASV:0f67af7ad88a7d4998e8de1b9dc550c9 1957 DNA sequence reads 4 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
102.100.100/10601:102e0e391c49f54993cd5cf53b4802f8 2013-04-09 -10.495855 105.566286 102.100.100/10601 Fungi Basidiomycota Agaricomycetes Phallales Phallaceae Phallus Phallus hadriani ASV:102e0e391c49f54993cd5cf53b4802f8 1957 DNA sequence reads 1 DNA sequence reads MATERIAL_SAMPLE 102.100.100/10601
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment