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@cthoyt
Last active March 9, 2026 21:04
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Bioregistry to Twitter Mapping

Why

Twitter isn't a friendly place anymore (to put it mildly), so it doesn't track with the Bioregistry project values to promote it as a platform. This gist will serve as a final resting place for the mappings, outside of the Bioregistry itself.

{
"_4dn.biosource": "4dn_dcic",
"addgene": "Addgene",
"agrovoc": "FAOAIMS",
"amoebadb": "eupathdb",
"apo": "yeastgenome",
"ark": "ARKsInTheOpen",
"arrayexpress": "ArrayExpressEBI",
"arraymap": "progenetix",
"ascl": "asclnet",
"bido": "sparontologies",
"biogrid": "biogrid",
"biogrid.interaction": "biogrid",
"bioportal": "bioontology",
"bioregistry": "bioregistry",
"bioschemas": "bioschemas",
"biro": "sparontologies",
"c4o": "sparontologies",
"caloha": "neXtProt_news",
"cath": "CATHDatabase",
"cbioportal": "cbioportal",
"cc": "cc_opensource",
"cellimage": "CellImageLibrar",
"cellosaurus": "cellosaurus",
"chebi": "chebit",
"chembl": "chembl",
"chemspider": "ChemSpider",
"cito": "sparontologies",
"cl": "CellOntology",
"cmo": "ratgenome",
"cmpo": "EBIOLS",
"credit": "contrib_roles",
"cryptodb": "VEuPathDB",
"csd": "ccdc_cambridge",
"dandi": "dandiarchive",
"datacite": "datacite",
"ddanat": "dictybase",
"ddpheno": "dictybase",
"deo": "sparontologies",
"disdriv": "diseaseontology",
"disprot": "disprot_db",
"doco": "sparontologies",
"doid": "diseaseontology",
"drugbank": "DrugBankDB",
"edam": "edamontology",
"edam.data": "edamontology",
"edam.format": "edamontology",
"edam.operation": "edamontology",
"edam.topic": "edamontology",
"ega.dataset": "EGAarchive",
"elsst": "CESSDA_Data/",
"ena.embl": "enasequence",
"ensembl": "ensembl",
"ensembl.bacteria": "ensemblgenomes",
"ensembl.fungi": "ensemblgenomes",
"ensembl.metazoa": "ensemblgenomes",
"envipath": "envipath",
"envo": "envoTweets",
"eolife": "eol",
"erm": "nanocommons",
"fabio": "sparontologies",
"fairsharing": "fairsharing_org",
"fivestars": "sparontologies",
"flybase": "flybasedotorg",
"fr": "sparontologies",
"frapo": "sparontologies",
"frbr": "sparontologies",
"fungidb": "fungidb",
"gbif": "GBIF",
"genewiki": "GeneWikiPulse",
"giardiadb": "EuPathDB",
"gitlab": "gitlab",
"glytoucan": "glytoucan",
"gnd": "gndnet",
"go": "news4go",
"gpcrdb": "gpcrdb",
"gpmdb": "GPMDB",
"grid": "grid_ac",
"gudmap": "GUDMAP",
"hmdb": "WishartLab",
"hp": "hp_ontology",
"hpa": "ProteinAtlas",
"icepo": "neXtProt_news",
"idomal": "VectorBase",
"idr": "openmicroscopy",
"igsr": "1000genomes",
"inchi": "inchi_trust",
"innatedb": "innatedb",
"intact": "intact_project",
"interpro": "InterProDB",
"irefweb": "wodaklab",
"linkml": "linkml_data",
"lipidmaps": "lipidmaps",
"loinc": "LOINC",
"maxo": "MonarchInit",
"metacyc.compound": "BioCyc",
"mgi": "mgi_mouse",
"mint": "MINT_database",
"mmo": "ratgenome",
"mmrrc": "mmrc",
"modeldb": "SenseLabProject",
"mondo": "MonarchInit",
"nasc": "NascArabidopsis",
"ncats.bioplanet": "ncats_nih_gov",
"ndex": "NDExProject",
"neurolex": "SciCrunch",
"nextprot": "neXtProt_news",
"nextprot.family": "neXtProt_news",
"nif.ext": "SciCrunch",
"nif.std": "SciCrunch",
"nlx.anat": "SciCrunch",
"nlx.br": "SciCrunch",
"nlx.cell": "SciCrunch",
"nlx.chem": "SciCrunch",
"nlx.dys": "SciCrunch",
"nlx.func": "SciCrunch",
"nlx.inv": "SciCrunch",
"nlx.mol": "SciCrunch",
"nlx.oen": "SciCrunch",
"nlx.org": "SciCrunch",
"nlx.qual": "SciCrunch",
"nlx.res": "SciCrunch",
"nlx.sub": "SciCrunch",
"obo": "OBOFoundry",
"orcid": "ORCID_Org",
"orpha": "orphanet",
"pdb": "PDBj_en",
"pfam": "Xfam_EBI",
"pgx": "progenetix",
"phylomedb": "phylomedb",
"plasmodb": "VEuPathDB",
"pmr.exposure": "physiomeproject",
"po": "planteome",
"pride": "pride_ebi",
"pubchem.bioassay": "pubchem",
"pubchem.cell": "pubchem",
"pubchem.classification": "pubchem",
"pubchem.compound": "pubchem",
"pubchem.element": "pubchem",
"pubchem.substance": "pubchem",
"puro": "sparontologies",
"pw": "ratgenome",
"pwo": "sparontologies",
"rfam": "RfamDB",
"rgd": "ratgenome",
"rgd.qtl": "ratgenome",
"rgd.strain": "ratgenome",
"rhea": "rhea_db",
"rnacentral": "RNAcentral",
"ror": "ResearchOrgs",
"rs": "ratgenome",
"sbo": "biomodels",
"scopus": "Scopus",
"scoro": "sparontologies",
"sgd": "yeastgenome",
"sgn": "solgenomics",
"smpdb": "WishartLab",
"soybase": "SoyBaseDatabase",
"spp": "sigpathproject",
"srao": "FAIRsharing_org",
"sugarbind": "ISBSIB",
"swiss-model": "SWISS_MODEL",
"treebase": "treebase",
"trichdb": "eupathdb",
"tritrypdb": "VEuPathDB",
"uberon": "uberanat",
"vectorbase": "VectorBase",
"wikidata": "wikidata",
"wikipathways": "WikiPathways",
"wormbase": "wormbase",
"worms": "WRMarineSpecies",
"xco": "ratgenome",
"xenbase": "Xenbase",
"ymdb": "WishartLab",
"zenodo.record": "zenodo_org",
"zfin": "zfinmod"
}
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