christianrickert

/**
 * A basic GUI to help monitor memory usage in QuPath.
 *
 * This helps both to find & address out-of-memory troubles by
 *   1. Showing how much memory is in use over time
 *   2. Giving a button to clear the tile cache - which can be
 *      using up precious memory
 *   3. Giving quick access to control the number of threads used
 *      for parallel processing
 *

christianrickert

# remove previous conda environment (optional)
conda deactivate
conda remove --name cellpose --all

# create your `cellpose` environment
conda create --name cellpose

# install dependencies and `cellpose[gui]` package from `conda-forge`
conda activate cellpose
conda install -c conda-forge pyqt pyqtgraph 'cellpose[gui]'

christianrickert

@ECHO OFF
TITLE Restic backup

:: mount network drive for Administrator command prompt
NET USE Z: \\data.server.pvt\your\data

:: manually create remote restic repository with (optional) compression
:: restic.exe init --repo "Z:\repo" --repository-version latest

:: set RESTIC_PASSWORD system variable before accessing repository

christianrickert

## R expects this file to be in its hidden config folder
# mkdir ~/.R
# touch ~/.R/Makevars

## Install 'OpenMP' using Homebrew in Terminal
# brew update && brew install libomp

## Include 'OpenMP' library with clang
HOMEBREW_PATH=/opt/homebrew
# 'openmp' was symlinked (package)

christianrickert

autocmd BufNewFile,BufRead *.ijm set syntax=C