Related Setup: https://gist.github.com/hofmannsven/6814278
Related Pro Tips: https://ochronus.com/git-tips-from-the-trenches/
| # http://stackoverflow.com/questions/338285/prevent-duplicates-from-being-saved-in-bash-history | |
| # remove duplicates while preserving input order | |
| function dedup { | |
| #awk '! x[$0]++' $@ | |
| tac $@ | awk '! x[$0]++' | tac | |
| } | |
| # removes $HISTIGNORE commands from input | |
| function remove_histignore { |
| #!/usr/bin/env python3 | |
| # -*- coding: utf-8 -*- | |
| """ | |
| Created on Thu Nov 14 10:18:35 2019 | |
| @author: Paolo Cozzi <paolo.cozzi@ibba.cnr.it> | |
| An etude of private methods on python and name mangling. For references, a | |
| recap of underscore naming convenctions: |
| name: skbio | |
| channels: | |
| - !!python/unicode | |
| 'bioconda' | |
| - !!python/unicode | |
| 'r' | |
| - !!python/unicode | |
| 'defaults' | |
| dependencies: | |
| - !!python/unicode |
| ##fileformat=VCFv4.1 | |
| ##fileDate=20150619 | |
| ##source=freeBayes v0.9.20 | |
| ##phasing=none | |
| ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data"> | |
| ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total read depth at the locus"> | |
| ##INFO=<ID=DPB,Number=1,Type=Float,Description="Total read depth per bp at the locus; bases in reads overlapping / bases in haplotype"> | |
| ##INFO=<ID=AC,Number=.,Type=Integer,Description="Total number of alternate alleles in called genotypes"> | |
| ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes"> | |
| ##INFO=<ID=AF,Number=.,Type=Float,Description="Estimated allele frequency in the range (0,1]"> |
Related Setup: https://gist.github.com/hofmannsven/6814278
Related Pro Tips: https://ochronus.com/git-tips-from-the-trenches/